dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001479_142|CGC1
Gene ID: MGYG000001479_02921
Location and strand information: 36534 - 37538 (-)
Family: 3.A.1.141.1
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000001479_142|CGC1
Gene ID: MGYG000001479_02922
Location and strand information: 37795 - 38967 (-)
Family: 2.A.1.7.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001479_142|CGC1
Gene ID: MGYG000001479_02923
Location and strand information: 39109 - 40833 (-)
Family: null
Protein type: null
Protein description: Phosphoglucomutase

Gene clsuter ID: MGYG000001479_142|CGC1
Gene ID: MGYG000001479_02924
Location and strand information: 41208 - 42548 (-)
Family: 2.A.22.5.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001479_142|CGC1
Gene ID: MGYG000001479_02925
Location and strand information: 43185 - 43685 (+)
Family: null
Protein type: null
Protein description: RNA polymerase-binding transcription factor CarD

Gene clsuter ID: MGYG000001479_142|CGC1
Gene ID: MGYG000001479_02926
Location and strand information: 43706 - 43906 (-)
Family: CSD
Protein type: TF
Protein description: Cold shock-like protein CspLA

Gene clsuter ID: MGYG000001479_142|CGC1
Gene ID: MGYG000001479_02927
Location and strand information: 44140 - 45753 (-)
Family: GH13|GH13_36
Protein type: CAZyme
Protein description: Alpha-amylase
Protein isoelectric point: 6.9481
Protein molecular weight: 60642.91
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001479_142|CGC1
Gene ID: MGYG000001479_02928
Location and strand information: 45820 - 46674 (-)
Family: 3.A.1.1.27
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001479_142|CGC1
Gene ID: MGYG000001479_02929
Location and strand information: 46674 - 48161 (-)
Family: 3.A.1.1.27
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001479_142|CGC1
Gene ID: MGYG000001479_02930
Location and strand information: 48299 - 49522 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: Cyclodextrin-binding protein

Gene clsuter ID: MGYG000001479_142|CGC1
Gene ID: MGYG000001479_02931
Location and strand information: 49606 - 51948 (-)
Family: GT35
Protein type: CAZyme
Protein description: Maltodextrin phosphorylase
Protein isoelectric point: 6.0303
Protein molecular weight: 88928.65
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001479_142|CGC1
Gene ID: MGYG000001479_02932
Location and strand information: 51993 - 53480 (-)
Family: GH77
Protein type: CAZyme
Protein description: 4-alpha-glucanotransferase
Protein isoelectric point: 7.0356
Protein molecular weight: 57186.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001479_142|CGC1
Gene ID: MGYG000001479_02933
Location and strand information: 53805 - 54806 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional repressor CytR

Gene clsuter ID: MGYG000001479_142|CGC1
Gene ID: MGYG000001479_02934
Location and strand information: 54846 - 55619 (-)
Family: 3.A.1.14.22
Protein type: TC
Protein description: putative siderophore transport system ATP-binding protein YusV

Gene clsuter ID: MGYG000001479_142|CGC1
Gene ID: MGYG000001479_02935
Location and strand information: 55626 - 56642 (-)
Family: 3.A.1.14.4
Protein type: TC
Protein description: putative siderophore transport system permease protein YfhA

Gene clsuter ID: MGYG000001479_142|CGC1
Gene ID: MGYG000001479_02936
Location and strand information: 56645 - 57652 (-)
Family: 3.A.1.14.4
Protein type: TC
Protein description: putative siderophore transport system permease protein YfiZ

Gene clsuter ID: MGYG000001479_142|CGC1
Gene ID: MGYG000001479_02937
Location and strand information: 57738 - 58721 (+)
Family: 3.A.1.14.8
Protein type: TC
Protein description: putative siderophore-binding lipoprotein YfiY

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001479_02927	GH13_e196\|3.2.1.54\|3.2.1.1	starch
MGYG000001479_02931	GT35_e0\|2.4.1.1
MGYG000001479_02932	GH77_e5\|2.4.1.25	starch

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is starch

Substrate predicted by dbCAN-PUL is starch download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001479_02921	Vitamin B12 import ATP-binding protein BtuD	TC	36534	37538	-	3.A.1.141.1
MGYG000001479_02922	hypothetical protein	TC	37795	38967	-	2.A.1.7.6
MGYG000001479_02923	Phosphoglucomutase	null	39109	40833	-	PGM_PMM_I\| PGM_PMM_II\| PGM_PMM_III\| PGM_PMM_IV
MGYG000001479_02924	hypothetical protein	TC	41208	42548	-	2.A.22.5.2
MGYG000001479_02925	RNA polymerase-binding transcription factor CarD	null	43185	43685	+	CarD_CdnL_TRCF
MGYG000001479_02926	Cold shock-like protein CspLA	TF	43706	43906	-	CSD
MGYG000001479_02927	Alpha-amylase	CAZyme	44140	45753	-	GH13\| GH13_36
MGYG000001479_02928	hypothetical protein	TC	45820	46674	-	3.A.1.1.27
MGYG000001479_02929	hypothetical protein	TC	46674	48161	-	3.A.1.1.27
MGYG000001479_02930	Cyclodextrin-binding protein	STP	48299	49522	-	SBP_bac_1
MGYG000001479_02931	Maltodextrin phosphorylase	CAZyme	49606	51948	-	GT35
MGYG000001479_02932	4-alpha-glucanotransferase	CAZyme	51993	53480	-	GH77
MGYG000001479_02933	HTH-type transcriptional repressor CytR	TF	53805	54806	+	LacI
MGYG000001479_02934	putative siderophore transport system ATP-binding protein YusV	TC	54846	55619	-	3.A.1.14.22
MGYG000001479_02935	putative siderophore transport system permease protein YfhA	TC	55626	56642	-	3.A.1.14.4
MGYG000001479_02936	putative siderophore transport system permease protein YfiZ	TC	56645	57652	-	3.A.1.14.4
MGYG000001479_02937	putative siderophore-binding lipoprotein YfiY	TC	57738	58721	+	3.A.1.14.8
Protein ID	Protein Name	Type	Start	End	Strand	Signature